{ "_id": "6a1bf6fb1d7bb097a0a26a19", "Package": "mads", "Type": "Package", "Title": "Multi-Analysis Distance Sampling", "Version": "0.1.6", "Author": "Laura Marshall", "Maintainer": "Laura Marshall ", "Description": "Performs distance sampling analyses on a number of species\nat once and can account for unidentified sightings, model\nuncertainty and covariate uncertainty. Unidentified sightings\nrefer to sightings which cannot be allocated to a single\nspecies but may instead be allocated to a group of species. The\nabundance of each unidentified group is estimated and then\nprorated to the species estimates. Model uncertainty should be\nincorporated when multiple models give equally good fit to the\ndata but lead to large differences in estimated density /\nabundance. Covariate uncertainty should be incorporated when\ncovariates cannot be measured accurately, for example this is\noften the case for group size in marine mammal surveys.\nVariance estimation for these methods is via a non parametric\nbootstrap. The methods implemented are described in Gerodette\nT. and Forcada J. (2005) <10.3354/meps291001> Non-recovery of\ntwo spotted and spinner dolphin populations in the eastern\ntropical Pacific Ocean.", "BugReports": "https://github.com/DistanceDevelopment/mads/issues", "License": "GPL (>=2)", "Collate": "'accumulate.results.R' 'calculate.dht.R'\n'check.bootstrap.options.r' 'check.convergence.R'\n'check.fitted.R' 'check.covar.uncertainty.R'\n'check.ddf.models.R' 'check.species.code.definitions.R'\n'check.species.presence.r' 'create.obs.table.R'\n'create.param.arrays.r' 'create.result.arrays.R'\n'execute.multi.analysis.R' 'fit.ddf.models.R'\n'format.dht.results.R' 'get.datasets.R' 'glossary.R'\n'mae.warning.R' 'model.description.R' 'object.description.R'\n'process.bootstrap.results.R' 'process.warnings.R'\n'prorate.unidentified.R' 'renumber.duplicates.R'\n'resample.covariates.R' 'resample.data.R' 'rtpois.R'\n'store.param.ests.R' 'summary.ma.allspecies.R'\n'summary.ma.allunid.R' 'summary.ma.analysis.R' 'summary.ma.R'\n'summary.ma.species.R' 'summary.ma.unid.R' 'mads-package.R'", "RoxygenNote": "7.1.0", "Encoding": "UTF-8", "Config/pak/sysreqs": "cmake", "Repository": "https://distancedevelopment.r-universe.dev", "Date/Publication": "2023-11-23 21:35:38 UTC", "RemoteUrl": "https://github.com/distanceDevelopment/mads", "RemoteRef": "HEAD", "RemoteSha": "d3f9e9979e3c47c19d1c0550a8cd3b4632def9e1", "RemoteSubdir": "mads", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-31 08:50:20 UTC", "User": "root" }, "MD5sum": "ad57b7f668fe790bcf94d0262aa59c08", "_user": "distancedevelopment", "_type": "src", "_file": "mads_0.1.6.tar.gz", "_fileid": "255dfa304723f1105439d90be00f2d6da4c60d04c1afeb1553fe38f40fa19299", "_filesize": 204034, "_sha256": "255dfa304723f1105439d90be00f2d6da4c60d04c1afeb1553fe38f40fa19299", "_created": "2026-05-31T08:50:20.000Z", "_published": "2026-05-31T08:53:15.930Z", "_distro": "noble", "_jobs": [ { "job": 78713286243, "time": 138, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": 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"https://github.com/r-universe/distancedevelopment/actions/runs/26708092203", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/distanceDevelopment/mads", "_commit": { "id": "d3f9e9979e3c47c19d1c0550a8cd3b4632def9e1", "author": "Len Thomas ", "committer": "GitHub ", "message": "Update README.md\n\nAdded notice that it's no longer under development", "time": 1700775338 }, "_maintainer": { "name": "Laura Marshall", "email": "lhm@st-and.ac.uk", "login": "lhmarshall", "description": "", "uuid": 1295691 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "mrds", "role": "Depends" }, { "package": "stats", "role": "Depends" }, { "package": "testthat", "role": "Suggests" } ], "_owner": "distancedevelopment", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 2, "_contributors": [ { "user": "lhmarshall", "count": 87, "uuid": 1295691 }, { "user": "lenthomas", "count": 1, 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